| active_area_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| adjust_internal_cell_couplings(std::vector< couplings_map > &dst) | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| anode_kinetics | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| anode_reactionheat | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| assemble_bdry_Jacobian_matrix(FuelCell::ApplicationCore::MatrixVector &bdry_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_bdry_linear_matrix(FuelCell::ApplicationCore::MatrixVector &bdry_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_bdry_linear_rhs(FuelCell::ApplicationCore::FEVector &bdry_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_bdry_matrix(FuelCell::ApplicationCore::MatrixVector &bdry_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlinevirtual |
| assemble_bdry_residual(FuelCell::ApplicationCore::FEVector &bdry_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlinevirtual |
| assemble_cell_Jacobian_matrix(FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_cell_linear_matrix(FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_cell_linear_rhs(FuelCell::ApplicationCore::FEVector &cell_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_cell_matrix(FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| assemble_cell_residual(FuelCell::ApplicationCore::FEVector &cell_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| assemble_cell_residual_rhs(FuelCell::ApplicationCore::FEVector &cell_residual, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| assemble_flags | FuelCellShop::Equation::EquationBase< dim > | protected |
| assemble_matrix_for_equation(FuelCell::ApplicationCore::MatrixVector &cell_matrices, const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, const std::string &eq_name, const FEValuesBase< dim > &test_fe, const std::vector< std::vector< double > > &test_shape_functions, const double &sourceterm_factor) | FuelCellShop::Equation::ReactionSourceTerms< dim > | protectedvirtual |
| bdry | FuelCellShop::Equation::EquationBase< dim > | protected |
| belongs_to_boundary(const unsigned int &tria_boundary_id, const unsigned int ¶m_boundary_id) const | FuelCellShop::Equation::EquationBase< dim > | inlineprotected |
| boundary_types | FuelCellShop::Equation::EquationBase< dim > | protected |
| cathode_kinetics | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| cathode_reactionheat | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| cell | FuelCellShop::Equation::EquationBase< dim > | protected |
| cell_matrix_counter | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| cell_residual_counter | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| component_boundaryID_value | FuelCellShop::Equation::EquationBase< dim > | protected |
| component_materialID_value | FuelCellShop::Equation::EquationBase< dim > | protected |
| counter | FuelCellShop::Equation::EquationBase< dim > | protected |
| current_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| data | FuelCellShop::Equation::EquationBase< dim > | protected |
| dcurrent_dphiM_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dcurrent_dphiS_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dcurrent_dT_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dcurrent_dxHydrogen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dcurrent_dxOxygen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dcurrent_dxWater_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dealII_to_appframe(FuelCell::ApplicationCore::MatrixVector &dst, const FullMatrix< double > &src, const std::vector< unsigned int > &matrix_block_indices) const | FuelCellShop::Equation::EquationBase< dim > | protected |
| dealII_to_appframe(FuelCell::ApplicationCore::FEVector &dst, const Vector< double > &src, const std::vector< unsigned int > &residual_indices) const | FuelCellShop::Equation::EquationBase< dim > | protected |
| declare_parameters(ParameterHandler ¶m) const | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| dheat_dphiM_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dheat_dphiS_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dheat_dT_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dheat_dxHydrogen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dheat_dxOxygen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dheat_dxWater_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| dofs_per_cell | FuelCellShop::Equation::EquationBase< dim > | protected |
| equation_name | FuelCellShop::Equation::EquationBase< dim > | protected |
| equation_name_liquid_water | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| EquationBase(FuelCell::SystemManagement &sys_management, boost::shared_ptr< FuelCell::ApplicationCore::ApplicationData > data=boost::shared_ptr< FuelCell::ApplicationCore::ApplicationData >()) | FuelCellShop::Equation::EquationBase< dim > | protected |
| F | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_capillarytranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_electrontranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_hydrogentranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_oxygentranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_protontranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_rev_heat_ccl | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_saturationtranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| factor_watertranseq_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| get_anode_kinetics() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_boundary_types() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_cathode_kinetics() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_component_boundaryID_value() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_component_materialID_value() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_equation_name() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_factor_rev_heat_ccl() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_internal_cell_couplings() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_internal_flux_couplings() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_irrev_heat_acl() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_irrev_heat_ccl() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_matrix_block_indices() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_multi_boundary_types() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_multi_output_types() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_output_types() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_residual_indices() const | FuelCellShop::Equation::EquationBase< dim > | inline |
| get_rev_heat() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| get_water_vap_heat_ccl() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| heat_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| initialize(ParameterHandler ¶m) | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| internal_cell_couplings | FuelCellShop::Equation::EquationBase< dim > | protected |
| internal_flux_couplings | FuelCellShop::Equation::EquationBase< dim > | protected |
| irrev_heat_acl | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| irrev_heat_ccl | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| JxW_bdry | FuelCellShop::Equation::EquationBase< dim > | protected |
| JxW_cell | FuelCellShop::Equation::EquationBase< dim > | protected |
| lambda | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| last_iter_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| M_water | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| make_assemblers_bdry_constant_data(const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_assemblers_bdry_variable_data(const typename FuelCell::ApplicationCore::DoFApplication< dim >::FaceInfo &bdry_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_assemblers_cell_constant_data(const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info) | FuelCellShop::Equation::ReactionSourceTerms< dim > | protectedvirtual |
| make_assemblers_cell_variable_data(const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::ReactionSourceTerms< dim > | protectedvirtual |
| make_assemblers_generic_constant_data() | FuelCellShop::Equation::ReactionSourceTerms< dim > | protectedvirtual |
| make_boundary_types() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_component_boundaryID_value() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_component_materialID_value() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_internal_cell_couplings() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_internal_flux_couplings() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_matrix_block_indices() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_multi_boundary_types() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_multi_output_types() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_output_types() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| make_residual_indices() | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| matrix_block_indices | FuelCellShop::Equation::EquationBase< dim > | protected |
| multi_boundary_types | FuelCellShop::Equation::EquationBase< dim > | protected |
| multi_output_types | FuelCellShop::Equation::EquationBase< dim > | protected |
| n_q_points_bdry | FuelCellShop::Equation::EquationBase< dim > | protected |
| n_q_points_cell | FuelCellShop::Equation::EquationBase< dim > | protected |
| name_base_variable | FuelCellShop::Equation::EquationBase< dim > | protected |
| normal_vectors | FuelCellShop::Equation::EquationBase< dim > | protected |
| output_types | FuelCellShop::Equation::EquationBase< dim > | protected |
| p_liquid_water | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_m | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_p_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_phiM_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_phiS_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_s | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_s_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_T_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_xHydrogen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_xOxygen_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| phi_xWater_cell | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| print_caller_name(const std::string &caller_name) const | FuelCellShop::Equation::EquationBase< dim > | protected |
| print_equation_info() const | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |
| ReactionSourceTerms(FuelCell::SystemManagement &system_management, boost::shared_ptr< FuelCell::ApplicationCore::ApplicationData > data=boost::shared_ptr< FuelCell::ApplicationCore::ApplicationData >()) | FuelCellShop::Equation::ReactionSourceTerms< dim > | |
| residual_indices | FuelCellShop::Equation::EquationBase< dim > | protected |
| residual_vector_name | FuelCellShop::Equation::EquationBase< dim > | protected |
| rev_heat | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| s_liquid_water | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| select_cell_assemblers(const typename FuelCell::ApplicationCore::DoFApplication< dim >::CellInfo &cell_info, FuelCellShop::Layer::BaseLayer< dim > *const layer) | FuelCellShop::Equation::EquationBase< dim > | inlineprotected |
| set_anode_kinetics(FuelCellShop::Kinetics::BaseKinetics *kinetics) | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| set_cathode_kinetics(FuelCellShop::Kinetics::BaseKinetics *kinetics) | FuelCellShop::Equation::ReactionSourceTerms< dim > | inline |
| set_parameters(const std::vector< std::string > &name_dvar, const std::vector< double > &value_dvar, ParameterHandler ¶m) | FuelCellShop::Equation::EquationBase< dim > | inlineprotectedvirtual |
| solution_vector_name | FuelCellShop::Equation::EquationBase< dim > | protected |
| standard_to_block_wise(FullMatrix< double > &target) const | FuelCellShop::Equation::EquationBase< dim > | protected |
| standard_to_block_wise(Vector< double > &target) const | FuelCellShop::Equation::EquationBase< dim > | protected |
| system_management | FuelCellShop::Equation::EquationBase< dim > | protected |
| t_rev | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| tangential_vectors | FuelCellShop::Equation::EquationBase< dim > | protected |
| variable_boundary_data | FuelCellShop::Equation::EquationBase< dim > | |
| variable_initial_data | FuelCellShop::Equation::EquationBase< dim > | |
| water_vap_heat_ccl | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| water_vapour_phase | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| x_hydrogen | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| x_oxygen | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| x_water | FuelCellShop::Equation::ReactionSourceTerms< dim > | protected |
| ~EquationBase() | FuelCellShop::Equation::EquationBase< dim > | protectedvirtual |
| ~ReactionSourceTerms() | FuelCellShop::Equation::ReactionSourceTerms< dim > | virtual |